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南京农业大学农学院《The Plant Cell》发表宋庆鑫教授团队“Integrative omics analysis elucidates the genetic basis underlying seed weight and oil content in soybean”（图）
宋庆鑫 遗传 基因 解析
2024/6/11
大豆是世界上最重要的油料作物之一，也是豆制食品加工业的重要原料。解析大豆产量和品质调控的遗传机制和关键基因，对于通过分子设计育种培育高产优质大豆新品种具有重要意义。大豆产量和品质相关农艺性状大部分是复杂性状，受一因多效和遗传连锁的影响，性状间呈现耦合性相关。挖掘协同调控产量和品质相关性状的关键基因和解析重要农艺性状耦合的遗传网络，可以为培育高产优质大豆品种提供重要理论基础。以往的研究往往针对大豆单...
Protocol: low cost fast and efficient generation of molecular tools for small RNA analysis
Vector Target mimic miRNA, Cloning Plant Downregulation
2024/1/19
Small RNAs are sequence-dependent negative regulators of gene expression involved in many relevant plant processes such as development, genome stability, or stress response. Functional characterizatio...
Genome-wide analysis of the AREB/ABF gene lineage in land plants and functional analysis of TaABF3 in Arabidopsis
ABFs Land plants Phylogenetic relationship Expression analysis TaABFs Drought stress
2023/12/15
Previous studies have shown that ABFs (abscisic acid-responsive transcription factors) are important ABA-signaling components that participate in abiotic stress response. However, little is known abou...
Genome-wide analysis and expression profile of the bZIP gene family in poplar
Poplar bZIP gene family Tissue-differential expression Salt stress Co-expression analysis
2023/12/8
The bZIP gene family, which is widely present in plants, participates in varied biological processes including growth and development and stress responses. How do the genes regulate such biological pr...
Simulating the Effects of Thinning Events on Forest Growth and Water Services Asks for Daily Analysis of Underlying Processes
ack forest forest hydrology drought analysis thinning resolution
2023/12/7
Forest growth function and water cycle are affected by climatic conditions, making climate-sensitive models, e.g., process-based, crucial to the simulation of dynamics of forest and water interactions...
Analysis of Regional Distribution of Tree Species Using Multi-Seasonal Sentinel-1&2 Imagery within Google Earth Engine
multisensor tree species large areas cloud-computing machine learning
2023/12/6
Accurate information on tree species is in high demand for forestry management and further investigations on biodiversity and environmental monitoring. Over regional or large areas, distinguishing tre...
Analysis of Landscape Connectivity among the Habitats of Asian Elephants in Keonjhar Forest Division
landscape connectivity least-resistant paths habitat core Asian elephant (Elephas maximus) human–elephant conflict movement barrier centrality
2023/12/5
Land development has impacted natural landforms extensively, causing a decline in resources and negative consequences to elephant populations, habitats, and gene flow. Often, elephants seek to fulfill...
Semantic Segmentation and Analysis on Sensitive Parameters of Forest Fire Smoke Using Smoke-Unet and Landsat-8 Imagery
forest fire remote sensing smoke segmentation Smoke-Unet attention mechanism residual block Landsat-8 band sensibility
2023/12/5
Forest fire is a ubiquitous disaster which has a long-term impact on the local climate as well as the ecological balance and fire products based on remote sensing satellite data have developed rapidly...
Time Series Analysis of Landsat Data for Investigating the Relationship between Land Surface Temperature and Forest Changes in Paphos Forest, Cyprus
time series Landsat Mediterranean forest LST NDVI Kalman filter decomposition cross-correlation breakpoints Big Earth Observation Data
2023/12/1
This study aims to investigate how alternations of the land surface temperature (LST) affects the normalized difference vegetation index (NDVI) in Paphos forest, Cyprus, using Landsat-5 and Landsat-8 ...
Error Analysis on the Five Stand Biomass Growth Estimation Methods for a Sub-Alpine Natural Pine Forest in Yunnan, Southwestern China
above-ground biomass biomass growth error analysis Pinus densata forests
2023/11/22
Forest biomass measurement or estimation is critical for forest monitoring at the stand scale, but errors among different estimations in stand investigation are unclear. Thus, the Pinus densata natura...
Targeted and untargeted metabolomics reveals deep analysis of drought stress responses in needles and roots of Pinus taeda seedlings
drought tolerance phytohormones fatty acids neurotransmitters sugars amino acids organic acids ?avenoids and terpenoids
2023/11/16
Drought stress is one of major environmental stresses affecting plant growth and yield. Although Pinus taeda trees are planted in rainy southern China, local drought sometime occurs and can last sever...
A pangenome analysis pipeline provides insights into functional gene identification in rice
Pangenome Presence/absence variation Genomic diversity PAV-based GWAS
2023/4/21
A pangenome aims to capture the complete genetic diversity within a species and reduce bias in genetic analysis inherent in using a single reference
genome. However, the current linear format of most...
Genome-wide association mapping and gene expression analysis identify OsCPS1 as a new candidate gene controlling early seedling length in rice
rice shoot length genome-wide association study OsCPS1 selection
2023/4/21
High seedling vigor can improve the ability to compete against weeds and flooding at the seedling stage and is essential for the direct seeding of rice. Early shoot length is an important performance ...
Microbial Community Analysis in Sichuan South-road Dark Tea Piled Center at Pile-Fermentation Metaphase and Insight Into Organoleptic Quality Development Mediated by Aspergillus niger M10
Microbial Community Analysis Sichuan South-road Dark Tea Piled Center Pile-Fermentation Metaphase
2024/7/30
Microbes are critical in the Sichuan South-road Dark Tea (SSDT) organoleptic quality development during pile-fermentation. Piled tea center at fermenting metaphase is crucial for the conversion of its...
The XTH Gene Family in Schima superba: Genome-Wide Identification, Expression Profiles, and Functional Interaction Network Analysis
XTH Gene Family Genome-Wide Identification Schima superba
2023/6/2
Xyloglucan endotransglucosylase/hydrolase (XTH), belonging to glycoside hydrolase family 16, is one of the key enzymes in plant cell wall remodeling. Schima superba is an important timber and fireproo...